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- /* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
- * Copyright by The HDF Group. *
- * Copyright by the Board of Trustees of the University of Illinois. *
- * All rights reserved. *
- * *
- * This file is part of HDF5. The full HDF5 copyright notice, including *
- * terms governing use, modification, and redistribution, is contained in *
- * the COPYING file, which can be found at the root of the source code *
- * distribution tree, or in https://www.hdfgroup.org/licenses. *
- * If you do not have access to either file, you may request a copy from *
- * help@hdfgroup.org. *
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
- /*
- * This file contains public declarations for the H5S module.
- */
- #ifndef H5Spublic_H
- #define H5Spublic_H
- /* Public headers needed by this file */
- #include "H5public.h"
- #include "H5Ipublic.h"
- /* Define special dataspaces for dataset I/O operations */
- #define H5S_ALL 0 /* (hid_t) */
- #define H5S_BLOCK 1 /* (hid_t) */
- #define H5S_PLIST 2 /* (hid_t) */
- #define H5S_UNLIMITED HSIZE_UNDEF /**< Value for 'unlimited' dimensions */
- /**
- * The maximum dataspace rank or number of dimensions
- */
- #define H5S_MAX_RANK 32
- /* Flags for selection iterators */
- #define H5S_SEL_ITER_GET_SEQ_LIST_SORTED \
- 0x0001 /**< Retrieve elements from iterator in increasing offset order, for \
- * each call to retrieve sequences. Currently, this only applies to \
- * point selections, as hyperslab selections are always returned in \
- * increasing offset order. Note that the order is only increasing \
- * for each call to H5Sget_seq_list(), the next set of sequences \
- * could start with an earlier offset than the previous one. \
- */
- #define H5S_SEL_ITER_SHARE_WITH_DATASPACE \
- 0x0002 /**< Don't copy the dataspace selection when creating the selection \
- * iterator. This can improve performance of creating the iterator, \
- * but the dataspace \Bold{MUST NOT} be modified or closed until the \
- * selection iterator is closed or the iterator's behavior will be \
- * undefined. \
- */
- /**
- * Types of dataspaces
- */
- typedef enum H5S_class_t {
- H5S_NO_CLASS = -1, /**< Error */
- H5S_SCALAR = 0, /**< Singleton (scalar) */
- H5S_SIMPLE = 1, /**< Regular grid */
- H5S_NULL = 2 /**< Empty set */
- } H5S_class_t;
- /**
- * Different ways of combining selections
- */
- typedef enum H5S_seloper_t {
- H5S_SELECT_NOOP = -1, /**< Error */
- H5S_SELECT_SET = 0, /**< Select "set" operation */
- H5S_SELECT_OR, /**< Binary "or" operation for hyperslabs
- * (add new selection to existing selection)
- * \code
- * Original region: AAAAAAAAAA
- * New region: BBBBBBBBBB
- * A or B: CCCCCCCCCCCCCCCC
- * \endcode
- */
- H5S_SELECT_AND, /**< Binary "and" operation for hyperslabs
- * (only leave overlapped regions in selection)
- * \code
- * Original region: AAAAAAAAAA
- * New region: BBBBBBBBBB
- * A and B: CCCC
- * \endcode
- */
- H5S_SELECT_XOR, /**< Binary "xor" operation for hyperslabs
- * (only leave non-overlapped regions in selection)
- * \code
- * Original region: AAAAAAAAAA
- * New region: BBBBBBBBBB
- * A xor B: CCCCCC CCCCCC
- * \endcode
- */
- H5S_SELECT_NOTB, /**< Binary "not" operation for hyperslabs
- * (only leave non-overlapped regions in original selection)
- * \code
- * Original region: AAAAAAAAAA
- * New region: BBBBBBBBBB
- * A not B: CCCCCC
- * \endcode
- */
- H5S_SELECT_NOTA, /**< Binary "not" operation for hyperslabs
- * (only leave non-overlapped regions in new selection)
- * \code
- * Original region: AAAAAAAAAA
- * New region: BBBBBBBBBB
- * B not A: CCCCCC
- * \endcode
- */
- H5S_SELECT_APPEND, /**< Append elements to end of point selection */
- H5S_SELECT_PREPEND, /**< Prepend elements to beginning of point selection */
- H5S_SELECT_INVALID /**< Invalid upper bound on selection operations */
- } H5S_seloper_t;
- /**
- * Selection type
- */
- typedef enum {
- H5S_SEL_ERROR = -1, /**< Error */
- H5S_SEL_NONE = 0, /**< Empty selection */
- H5S_SEL_POINTS = 1, /**< Set of points */
- H5S_SEL_HYPERSLABS = 2, /**< Hyperslab */
- H5S_SEL_ALL = 3, /**< Everything */
- H5S_SEL_N /**< Sentinel \internal THIS MUST BE LAST */
- } H5S_sel_type;
- #ifdef __cplusplus
- extern "C" {
- #endif
- /* Operations on dataspaces, dataspace selections and selection iterators */
- /**
- * \ingroup H5S
- *
- * \brief Releases and terminates access to a dataspace
- *
- * \space_id
- *
- * \return \herr_t
- *
- * \details H5Sclose() releases a dataspace. Further access through the
- * dataspace identifier is illegal. Failure to release a dataspace with this
- * call will result in resource leaks.
- *
- * \version 1.4.0 Fortran subroutine introduced in this release.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sclose(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Performs an operation on a hyperslab and an existing selection and
- * returns the resulting selection
- *
- * \space_id
- * \param[in] op Operation to perform on the current selection
- * \param[in] start Offset of the start of of the hyperslab
- * \param[in] stride Hyperslab stride
- * \param[in] count Number of blocks included in the hyperslab
- * \param[in] block Size of a block in the hyperslab
- *
- * \return \hid_tv{dataspace}
- *
- * \details H5Scombine_hyperslab() combines a hyperslab selection specified
- * by \p start, \p stride, \p count and \p block with the current
- * selection for the dataspace \p space_id, creating a new dataspace
- * to return the generated selection. If the current selection is
- * not a hyperslab, it is freed and the hyperslab parameters passed
- * in are combined with the #H5S_SEL_ALL hyperslab (ie. a selection
- * composing the entire current extent). If either \p stride or
- * \p block is NULL, then it will be set to \p 1.
- *
- * \since 1.12.0
- *
- */
- H5_DLL hid_t H5Scombine_hyperslab(hid_t space_id, H5S_seloper_t op, const hsize_t start[],
- const hsize_t stride[], const hsize_t count[], const hsize_t block[]);
- /**
- * \ingroup H5S
- *
- * \brief Combine two hyperslab selections with an operation, returning a
- * dataspace with the resulting selection
- *
- * \space_id{space1_id}
- * \param[in] op Selection operator
- * \space_id{space2_id}
- *
- * \return \hid_t{dataspace}
- *
- * \details H5Scombine_select() combines two hyperslab selections
- * \p space1_id and \p space2_id with an operation, returning a
- * new dataspace with the resulting selection. The dataspace extent
- * from \p space1_id is copied for the dataspace extent of the
- * newly created dataspace.
- *
- * \since 1.12.0
- *
- */
- H5_DLL hid_t H5Scombine_select(hid_t space1_id, H5S_seloper_t op, hid_t space2_id);
- /**
- * \ingroup H5S
- *
- * \brief Creates an exact copy of a dataspace
- *
- * \space_id
- *
- * \return \hid_tv{dataspace}
- *
- * \details H5Scopy() creates a new dataspace which is an exact copy of the
- * dataspace identified by \p space_id. The dataspace identifier
- * returned from this function should be released with H5Sclose()
- * or resource leaks will occur.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- * \since 1.0.0
- *
- */
- H5_DLL hid_t H5Scopy(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Creates a new dataspace of a specified type
- *
- * \param[in] type Type of dataspace to be created
- *
- * \return \hid_t{dataspace}
- *
- * \details H5Screate() creates a new dataspace of a particular type. Currently
- * supported types are #H5S_SCALAR, #H5S_SIMPLE, and #H5S_NULL.
- *
- * Further dataspace types may be added later.
- *
- * A scalar dataspace, #H5S_SCALAR, has a single element, though that
- * element may be of a complex datatype, such as a compound or array
- * datatype. By convention, the rank of a scalar dataspace is always \p 0
- * (zero); think of it geometrically as a single, dimensionless point,
- * though that point can be complex.
- *
- * A simple dataspace, #H5S_SIMPLE, consists of a regular array of elements.
- *
- * A null dataspace, #H5S_NULL, has no data elements.
- *
- * The dataspace identifier returned by this function can be released with
- * H5Sclose() so that resource leaks will not occur.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- * \since 1.0.0
- *
- */
- H5_DLL hid_t H5Screate(H5S_class_t type);
- /**
- * \ingroup H5S
- * \brief Creates a new simple dataspace and opens it for access
- *
- * \param[in] rank Number of dimensions of dataspace
- * \param[in] dims Array specifying the size of each dimension
- * \param[in] maxdims Array specifying the maximum size of each dimension
- *
- * \return \hid_t{dataspace}
- *
- * \details H5Screate_simple() creates a new simple dataspace and opens it
- * for access, returning a dataspace identifier.
- *
- * \p rank is the number of dimensions used in the dataspace.
- *
- * \p dims is a one-dimensional array of size rank specifying the
- * size of each dimension of the dataset. \p maxdims is an array of
- * the same size specifying the upper limit on the size of each
- * dimension.
- *
- * Any element of \p dims can be \p 0 (zero). Note that no data can
- * be written to a dataset if the size of any dimension of its current
- * dataspace is \p 0. This is sometimes a useful initial state for
- * a dataset.
- *
- * \p maxdims may be the null pointer, in which case the upper limit
- * is the same as \p dims. Otherwise, no element of \p maxdims
- * should be smaller than the corresponding element of \p dims.
- *
- * If an element of \p maxdims is #H5S_UNLIMITED, the maximum size of
- * the corresponding dimension is unlimited.
- *
- * Any dataset with an unlimited dimension must also be chunked; see
- * H5Pset_chunk(). Similarly, a dataset must be chunked if \p dims
- * does not equal \p maxdims.
- *
- * The dataspace identifier returned from this function must be
- * released with H5Sclose() or resource leaks will occur.
- *
- * \note Once a dataspace has been created, specific regions or elements in
- * the dataspace can be selected and selections can be removed, as well.
- * For example, H5Sselect_hyperslab() selects a region in a dataspace and
- * H5Sselect_elements() selects array elements in a dataspace. These
- * functions are used for subsetting. H5Sselect_none() removes all
- * selections from a dataspace and is used in Parallel HDF5 when a process
- * does not have or need to write data.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- *
- * \since 1.0.0
- *
- */
- H5_DLL hid_t H5Screate_simple(int rank, const hsize_t dims[], const hsize_t maxdims[]);
- /**
- * \ingroup H5S
- *
- * \brief Decodes a binary object description of data space and returns a
- * new object handle
- *
- * \param[in] buf Buffer for the data space object to be decoded
- *
- * \return \hid_t{dataspace}
- *
- * \details Given an object description of a dataspace in binary in a
- * buffer, H5Sdecode() reconstructs the HDF5 data type object and
- * returns a new object handle for it. The binary description of the
- * object is encoded by H5Sencode(). The user is responsible for
- * passing in the right buffer. The types of dataspace addressed
- * in this function are null, scalar, and simple space. For a
- * simple dataspace, the selection information (for example,
- * hyperslab selection) is also encoded and decoded. A complex
- * dataspace has not been implemented in the library.
- *
- * \since 1.8.0
- *
- */
- H5_DLL hid_t H5Sdecode(const void *buf);
- /**
- * \ingroup H5S
- *
- * \brief Encodes a data space object description into a binary buffer
- *
- * \space_id{obj_id}
- * \param[in,out] buf Buffer for the object to be encoded into;
- * If the provided buffer is NULL, only the size
- * of buffer needed is returned through \p nalloc.
- * \param[in,out] nalloc The size of the allocated buffer
- * \fapl_id{fapl}
- *
- * \return \herr_t
- *
- * \details Given the data space identifier \p obj_id, H5Sencode2() converts
- * a data space description into binary form in a buffer. Using this
- * binary form in the buffer, a data space object can be
- * reconstructed with H5Sdecode() to return a new object handle
- * (#hid_t) for this data space.
- *
- * A preliminary H5Sencode2() call can be made to determine the
- * size of the buffer needed. This value is returned in \p nalloc.
- * That value can then be assigned to \p nalloc for a second
- * H5Sencode2() call, which will retrieve the actual encoded object.
- *
- * If the library determines that \p nalloc is not big enough for the
- * object, it simply returns the size of the buffer needed through
- * \p nalloc without encoding the provided buffer.
- *
- * The file access property list \p fapl_id is used to control the
- * encoding via the \a libver_bounds property (see
- * H5Pset_libver_bounds()). If the \a libver_bounds property is missing,
- * H5Sencode2() proceeds as if the \a libver_bounds property were set to
- * (#H5F_LIBVER_EARLIEST, #H5F_LIBVER_LATEST). (Functionally,
- * H5Sencode1() is identical to H5Sencode2() with \a libver_bounds set to
- * (#H5F_LIBVER_EARLIEST, #H5F_LIBVER_LATEST).)
- *
- * The types of data space that are addressed in this function are
- * null, scalar, and simple space. For a simple data space, the
- * information on the selection, for example, hyperslab selection,
- * is also encoded and decoded. A complex data space has not been
- * implemented in the library.
- *
- * \note Motivation: This function was introduced in HDF5-1.12 as part of the
- * H5Sencode() format change to enable 64-bit selection encodings and
- * a dataspace selection that is tied to a file. See the \ref_news_112
- * as well as the \ref_sencode_fmt_change.
- *
- * \since 1.12.0
- *
- */
- H5_DLL herr_t H5Sencode2(hid_t obj_id, void *buf, size_t *nalloc, hid_t fapl);
- /**
- * \ingroup H5S
- *
- * \brief Copies the extent of a dataspace
- *
- * \space_id{dst_id}
- * \space_id{src_id}
- *
- * \return \herr_t
- *
- * \details H5Sextent_copy() copies the extent from \p src_id to \p dst_id.
- * This action may change the type of the dataspace.
- *
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sextent_copy(hid_t dst_id, hid_t src_id);
- /**
- * \ingroup H5S
- *
- * \brief Determines whether two dataspace extents are equal
- *
- * \space_id{space1_id}
- * \space_id{space2_id}
- *
- * \return \htri_t
- *
- * \details H5Sextent_equal() determines whether the dataspace extents of
- * two dataspaces, \p space1_id and \p space2_id, are equal.
- *
- * \since 1.8.0
- *
- */
- H5_DLL htri_t H5Sextent_equal(hid_t space1_id, hid_t space2_id);
- /**
- * \ingroup H5S
- *
- * \brief Retrieves a regular hyperslab selection
- *
- * \space_id{spaceid}
- * \param[out] start Offset of the start of the regular hyperslab
- * \param[out] stride Stride of the regular hyperslab
- * \param[out] count Number of blocks in the regular hyperslab
- * \param[out] block Size of a block in the regular hyperslab
- *
- * \return \herr_t
- *
- * \details H5Sget_regular_hyperslab() takes the dataspace identifier,
- * \p spaceid, and retrieves the values of \p start, \p stride,
- * \p count, and \p block for the regular hyperslab selection.
- *
- * A regular hyperslab selection is a hyperslab selection
- * described by setting the \p offset, \p stride, \p count, and
- * \p block parameters to the H5Sselect_hyperslab() call. If
- * several calls to H5Sselect_hyperslab() are needed, the
- * hyperslab selection is irregular.
- *
- * See H5Sselect_hyperslab() for descriptions of \p offset,
- * \p stride, \p count, and \p block.
- *
- * \note If a hyperslab selection is originally regular, then becomes
- * irregular through selection operations, and then becomes regular
- * again, the final regular selection may be equivalent but not
- * identical to the original regular selection.
- *
- * \since 1.10.0
- *
- */
- H5_DLL htri_t H5Sget_regular_hyperslab(hid_t spaceid, hsize_t start[], hsize_t stride[], hsize_t count[],
- hsize_t block[]);
- /**
- * \ingroup H5S
- *
- * \brief Gets the bounding box containing the current selection
- *
- * \space_id{spaceid}
- * \param[out] start Starting coordinates of the bounding box
- * \param[out] end Ending coordinates of the bounding box, i.e., the
- * coordinates of the diagonally opposite corner
- *
- * \return \herr_t
- *
- * \details H5Sget_select_bounds() retrieves the coordinates of the bounding
- * box containing the current selection and places them into
- * user-supplied buffers.
- *
- * The \p start and \p end buffers must be large enough to hold
- * the dataspace rank number of coordinates.
- *
- * The bounding box exactly contains the selection. I.e., if a
- * 2-dimensional element selection is currently defined as containing
- * the points (4,5), (6,8), and (10,7), then the bounding box
- * will be (4, 5), (10, 8).
- *
- * The bounding box calculation includes the current offset of the
- * selection within the dataspace extent.
- *
- * Calling this function on a \a none selection will fail.
- *
- * \version 1.6.0 The \p start and \p end parameters have changed from type
- * \p hsize_t * to \p hssize_t *.
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.2.0
- *
- */
- H5_DLL herr_t H5Sget_select_bounds(hid_t spaceid, hsize_t start[], hsize_t end[]);
- /**
- * \ingroup H5S
- *
- * \brief Gets the number of element points in the current selection
- *
- * \space_id{spaceid}
- *
- * \return Returns the number of element points in the current dataspace
- * selection if successful. Otherwise returns a negative value.
- *
- * \details H5Sget_select_elem_npoints() returns the number of element
- * points in the current dataspace selection, so that the element
- * points can be retrieved with H5Sget_select_elem_pointlist().
- * (This is similar to the way that H5Sget_select_hyper_nblocks()
- * and H5Sget_select_hyper_blocklist() work with hyperslab
- * selections.)
- *
- * Coincidentally, H5Sget_select_npoints() and
- * H5Sget_select_elem_npoints() will always return the same value
- * when an element selection is queried, but
- * H5Sget_select_elem_npoints() does not work with other selection
- * types.
- *
- * \since 1.2.0
- *
- */
- H5_DLL hssize_t H5Sget_select_elem_npoints(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Gets the list of element points currently selected
- *
- * \space_id{spaceid}
- * \param[in] startpoint Element point to start with
- * \param[in] numpoints Number of element points to get
- * \param[out] buf List of element points selected
- *
- * \details H5Sget_select_elem_pointlist() returns the list of element
- * points in the current dataspace selection \p space_id. Starting
- * with the \p startpoint in the list of points, \p numpoints
- * points are put into the user's buffer. If the user's buffer
- * fills up before \p numpoints points are inserted, the buffer
- * will contain only as many points as fit.
- *
- * The element point coordinates have the same dimensionality
- * (rank) as the dataspace they are located within. The list of
- * element points is formatted as follows:\n
- * \<coordinate\>, followed by\n
- * the next coordinate,\n
- * etc.\n
- * until all of the selected element points have been listed.
- *
- * The points are returned in the order they will be iterated
- * through when the selection is read/written from/to disk.
- *
- * \since 1.2.0
- *
- */
- H5_DLL herr_t H5Sget_select_elem_pointlist(hid_t spaceid, hsize_t startpoint, hsize_t numpoints,
- hsize_t buf[/*numpoints*/]);
- /**
- * \ingroup H5S
- *
- * \brief Gets the list of hyperslab blocks currently selected
- *
- * \space_id{spaceid}
- * \param[in] startblock Hyperslab block to start with
- * \param[in] numblocks Number of hyperslab blocks to get
- * \param[out] buf List of hyperslab blocks selected
- *
- * \return \herr_t
- *
- * \details H5Sget_select_hyper_blocklist() returns a list of the hyperslab
- * blocks currently selected. Starting with the \p startblock-th block
- * in the list of blocks, \p numblocks blocks are put into the
- * user's buffer. If the user's buffer fills up before \p numblocks
- * blocks are inserted, the buffer will contain only as many blocks
- * as fit.
- *
- * The block coordinates have the same dimensionality (rank) as the
- * dataspace they are located within. The list of blocks is
- * formatted as follows:\n
- * \<"start" coordinate\>, immediately followed by\n
- * \<"opposite" corner coordinate\>, followed by\n
- * the next "start" and "opposite" coordinates,\n
- * etc. until all of the selected blocks have been listed.\n
- * No guarantee of any order of the blocks is implied.
- *
- * \since 1.2.0
- *
- */
- H5_DLL herr_t H5Sget_select_hyper_blocklist(hid_t spaceid, hsize_t startblock, hsize_t numblocks,
- hsize_t buf[/*numblocks*/]);
- /**
- * \ingroup H5S
- *
- * \brief Get number of hyperslab blocks
- *
- * \space_id{spaceid}
- *
- * \return Returns the number of hyperslab blocks in the current dataspace
- * selection if successful. Otherwise returns a negative value.
- *
- * \details H5Sget_select_hyper_nblocks() returns the number of hyperslab
- * blocks in the current dataspace selection.
- *
- * \since 1.2.0
- *
- */
- H5_DLL hssize_t H5Sget_select_hyper_nblocks(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Determines the number of elements in a dataspace selection
- *
- * \space_id{spaceid}
- *
- * \return Returns the number of elements in the selection if successful;
- * otherwise returns a negative value.
- *
- * \details H5Sget_select_npoints() determines the number of elements in
- * the current selection of a dataspace. It works with any
- * selection type, and is the correct way to retrieve the number
- * of elements in a selection.
- *
- * \version 1.4.0 Fortran subroutine introduced in this release.
- * \since 1.0.0
- *
- */
- H5_DLL hssize_t H5Sget_select_npoints(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Determines the type of the dataspace selection
- *
- * \space_id{spaceid}
- *
- * \return Returns the dataspace selection type, a value of the enumerated
- * datatype #H5S_sel_type, if successful.
- *
- * \details H5Sget_select_type() retrieves the type of dataspace selection
- * currently defined for the dataspace \p space_id. Valid values
- * for the dataspace selection type are:
- *
- * <table>
- * <tr>
- * <td>#H5S_SEL_NONE</td>
- * <td>No selection is defined</td>
- * </tr>
- * <tr>
- * <td>#H5S_SEL_POINTS</td>
- * <td>A sequence of points is selected</td>
- * </tr>
- * <tr>
- * <td>#H5S_SEL_HYPERSLABS</td>
- * <td>A hyperslab or compound hyperslab is selected</td>
- * </tr>
- * <tr>
- * <td>#H5S_SEL_ALL</td>
- * <td>The entire dataset is selected</td>
- * </tr>
- * </table>
- *
- * Otherwise returns a negative value.
- *
- * \since 1.6.0
- *
- */
- H5_DLL H5S_sel_type H5Sget_select_type(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Retrieves dataspace dimension size and maximum size
- *
- * \space_id
- * \param[out] dims Pointer to array to store the size of each dimension
- * \param[out] maxdims Pointer to array to store the maximum size of each
- * dimension
- *
- * \return Returns the number of dimensions in the dataspace if successful;
- * otherwise returns a negative value.
- *
- * \details H5Sget_simple_extent_dims() returns the size and maximum sizes
- * of each dimension of a dataspace \p space_id through the \p dims
- * and \p maxdims parameters.
- *
- * Either or both of \p dims and \p maxdims may be NULL.
- *
- * If a value in the returned array \p maxdims is #H5S_UNLIMITED (-1),
- * the maximum size of that dimension is unlimited.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- * \since 1.0.0
- *
- */
- H5_DLL int H5Sget_simple_extent_dims(hid_t space_id, hsize_t dims[], hsize_t maxdims[]);
- /**
- * \ingroup H5S
- *
- * \brief Determines the dimensionality of a dataspace
- *
- * \space_id
- *
- * \return Returns the number of dimensions in the dataspace if successful;
- * otherwise returns a negative value.
- *
- * \details H5Sget_simple_extent_ndims() determines the dimensionality (or
- * rank) of a dataspace.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- * \since 1.0.0
- *
- */
- H5_DLL int H5Sget_simple_extent_ndims(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Determines the number of elements in a dataspace
- *
- * \space_id
- *
- * \return Returns the number of elements in the dataspace if successful;
- * otherwise returns a negative value.
- *
- * \details H5Sget_simple_extent_npoints() determines the number of elements
- * in a dataspace \p space_id. For example, a simple 3-dimensional
- * dataspace with dimensions 2, 3, and 4 would have 24 elements.
- *
- * \version 1.4.0 Fortran subroutine introduced.
- * \since 1.0.0
- *
- */
- H5_DLL hssize_t H5Sget_simple_extent_npoints(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Determines the current class of a dataspace
- *
- * \space_id
- *
- * \return Returns a dataspace class name if successful;
- * otherwise #H5S_NO_CLASS (-1).
- *
- * \details H5Sget_simple_extent_type() determines the current class of a
- * dataspace \p space_id.
- *
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL H5S_class_t H5Sget_simple_extent_type(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Determines if a hyperslab selection is regular
- *
- * \space_id{spaceid}
- *
- * \return \htri_t
- *
- * \details H5Sis_regular_hyperslab() takes the dataspace identifier,
- * \p spaceid, and queries the type of the hyperslab selection.
- *
- * A regular hyperslab selection is a hyperslab selection described
- * by setting the offset, stride, count, and block parameters for
- * a single H5Sselect_hyperslab() call. If several calls to
- * H5Sselect_hyperslab() are needed, then the hyperslab selection
- * is irregular.
- *
- * \since 1.10.0
- *
- */
- H5_DLL htri_t H5Sis_regular_hyperslab(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Determines whether a dataspace is a simple dataspace
- *
- * \space_id
- *
- * \return \htri_t
- *
- * \details H5Sis_simple() determines whether or not a dataspace is a simple
- * dataspace.
- *
- * \note Currently, all dataspace objects are simple dataspaces; complex
- * dataspace support will be added in the future.
- *
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL htri_t H5Sis_simple(hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Refines a hyperslab selection with an operation, using a second
- * hyperslab to modify it
- *
- * \space_id{space1_id}
- * \param[in] op Selection operator
- * \space_id{space2_id}
- *
- * \return \herr_t
- *
- * \details H5Smodify_select() refines an existing hyperslab selection
- * \p space1_id with an operation \p op, using a second hyperslab
- * \p space2_id. The first selection is modified to contain the
- * result of \p space1_id operated on by \p space2_id.
- *
- * \since 1.12.0
- *
- */
- H5_DLL herr_t H5Smodify_select(hid_t space1_id, H5S_seloper_t op, hid_t space2_id);
- /**
- * \ingroup H5S
- *
- * \brief Sets the offset of a simple dataspace
- *
- * \space_id
- * \param[in] offset The offset at which to position the selection
- *
- * \return \herr_t
- *
- * \details H5Soffset_simple() sets the offset of a simple dataspace
- * \p space_id. The offset array must be the same number of
- * elements as the number of dimensions for the dataspace. If the
- * \p offset array is set to NULL, the offset for the dataspace is
- * reset to 0.
- *
- * This function allows the same shaped selection to be moved to
- * different locations within a dataspace without requiring it to
- * be redefined.
- *
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Soffset_simple(hid_t space_id, const hssize_t *offset);
- /**
- * \ingroup H5S
- *
- * \brief Closes a dataspace selection iterator
- *
- * \space_id{sel_iter_id}
- *
- * \return \herr_t
- *
- * \details H5Ssel_iter_close() closes a dataspace selection iterator
- * specified by \p sel_iter_id, releasing its state.
- *
- * \since 1.12.0
- *
- */
- H5_DLL herr_t H5Ssel_iter_close(hid_t sel_iter_id);
- /**\ingroup H5S
- *
- * \brief Creates a dataspace selection iterator for a dataspace's selection
- *
- * \space_id{spaceid}
- * \param[in] elmt_size Size of element in the selection
- * \param[in] flags Selection iterator flag
- *
- * \return \hid_t{valid dataspace selection iterator}
- *
- * \details H5Ssel_iter_create() creates a selection iterator and initializes
- * it to start at the first element selected in the dataspace.
- *
- * \since 1.12.0
- *
- */
- H5_DLL hid_t H5Ssel_iter_create(hid_t spaceid, size_t elmt_size, unsigned flags);
- /**
- * \ingroup H5S
- *
- * \brief Retrieves a list of offset / length sequences for the elements in
- * an iterator
- *
- * \space_id{sel_iter_id}
- * \param[in] maxseq Maximum number of sequences to retrieve
- * \param[in] maxbytes Maximum number of bytes to retrieve in sequences
- * \param[out] nseq Number of sequences retrieved
- * \param[out] nbytes Number of bytes retrieved, in all sequences
- * \param[out] off Array of sequence offsets
- * \param[out] len Array of sequence lengths
- *
- * \return \herr_t
- *
- * \details H5Ssel_iter_get_seq_list() retrieves a list of offset / length
- * pairs (a list of "sequences") matching the selected elements for
- * an iterator \p sel_iter_id, according to the iteration order for
- * the iterator. The lengths returned are in bytes, not elements.
- *
- * Note that the iteration order for "all" and "hyperslab"
- * selections is row-major (i.e. "C-ordered"), but the iteration
- * order for "point" selections is "in order selected", unless the
- * #H5S_SEL_ITER_GET_SEQ_LIST_SORTED flag is passed to
- * H5Ssel_iter_create() for a point selection.
- *
- * \p maxseq and \p maxbytes specify the most sequences or bytes
- * possible to place into the \p off and \p len arrays. \p nseq and
- * \p nbytes return the actual number of sequences and bytes put
- * into the arrays.
- *
- * Each call to H5Ssel_iter_get_seq_list() will retrieve the next
- * set of sequences for the selection being iterated over.
- *
- * The total number of bytes possible to retrieve from a selection
- * iterator is the \p elmt_size passed to H5Ssel_iter_create()
- * multiplied by the number of elements selected in the dataspace
- * the iterator was created from (which can be retrieved with
- * H5Sget_select_npoints(). When there are no further sequences of
- * elements to retrieve, calls to this routine will set \p nseq
- * and \p nbytes to zero.
- *
- * \since 1.12.0
- *
- */
- H5_DLL herr_t H5Ssel_iter_get_seq_list(hid_t sel_iter_id, size_t maxseq, size_t maxbytes, size_t *nseq,
- size_t *nbytes, hsize_t *off, size_t *len);
- /**
- * \ingroup H5S
- *
- * \brief Resets a dataspace selection iterator back to an initial state
- *
- * \param[in] sel_iter_id Identifier of the dataspace selection iterator
- * to reset
- * \param[in] space_id Identifier of the dataspace with selection to
- * iterate over
- *
- * \return \herr_t
- *
- * \details H5Ssel_iter_reset() resets a dataspace selection iterator back to
- * an initial state so that the iterator may be used for iteration
- * once again.
- *
- * \since 1.12.1
- *
- */
- H5_DLL herr_t H5Ssel_iter_reset(hid_t sel_iter_id, hid_t space_id);
- /**
- * \ingroup H5S
- *
- * \brief Adjusts a selection by subtracting an offset
- *
- * \space_id{spaceid}
- * \param[in] offset Offset to subtract
- *
- * \return \herr_t
- *
- * \details H5Sselect_adjust() shifts a dataspace selection by a specified
- * logical offset within the dataspace extent.
- *
- * \note This can be useful for VOL developers to implement chunked datasets.
- *
- * \since 1.12.0
- */
- H5_DLL herr_t H5Sselect_adjust(hid_t spaceid, const hssize_t *offset);
- /**
- * \ingroup H5S
- *
- * \brief Selects an entire dataspace
- *
- * \space_id{spaceid}
- *
- * \return \herr_t
- *
- * \details H5Sselect_all() selects the entire extent of the dataspace
- * \p dspace_id.
- *
- * More specifically, H5Sselect_all() sets the selection type to
- * #H5S_SEL_ALL, which specifies the entire dataspace anywhere it
- * is applied.
- *
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sselect_all(hid_t spaceid);
- /**
- * \ingroup H5S
- *
- * \brief Copies a selection from one dataspace to another
- *
- * \space_id{dst_id}
- * \space_id{src_id}
- *
- * \return \herr_t
- *
- * \details H5Sselect_copy() copies all selection information (including
- * offset) from the source dataspace \p src_id to the destination
- * dataspace \p dst_id.
- *
- * \since 1.12.0
- *
- */
- H5_DLL herr_t H5Sselect_copy(hid_t dst_id, hid_t src_id);
- /**
- * \ingroup H5S
- *
- * \brief Selects array elements to be included in the selection for a
- * dataspace
- *
- * \space_id
- * \param[in] op Operator specifying how the new selection is to be
- * combined with the existing selection for the dataspace
- * \param[in] num_elem Number of elements to be selected
- * \param[in] coord A pointer to a buffer containing a serialized copy of
- * a 2-dimensional array of zero-based values specifying
- * the coordinates of the elements in the point selection
- *
- * \return \herr_t
- *
- * \details H5Sselect_elements() selects array elements to be included in
- * the selection for the \p space_id dataspace. This is referred
- * to as a point selection.
- *
- * The number of elements selected is set in the \p num_elements
- * parameter.
- *
- * The \p coord parameter is a pointer to a buffer containing a
- * serialized 2-dimensional array of size \p num_elements by the
- * rank of the dataspace. The array lists dataset elements in the
- * point selection; that is, it’s a list of of zero-based values
- * specifying the coordinates in the dataset of the selected
- * elements. The order of the element coordinates in the \p coord
- * array specifies the order in which the array elements are
- * iterated through when I/O is performed. Duplicate coordinate
- * locations are not checked for. See below for examples of the
- * mapping between the serialized contents of the buffer and the
- * point selection array that it represents.
- *
- * The selection operator \p op determines how the new selection
- * is to be combined with the previously existing selection for
- * the dataspace. The following operators are supported:
- *
- * <table>
- * <tr>
- * <td>#H5S_SELECT_SET</td>
- * <td>Replaces the existing selection with the parameters from
- * this call. Overlapping blocks are not supported with this
- * operator. Adds the new selection to the existing selection.
- * </td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_APPEND</td>
- * <td>Adds the new selection following the last element of the
- * existing selection.</td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_PREPEND</td>
- * <td>Adds the new selection preceding the first element of the
- * existing selection.</td>
- * </tr>
- * </table>
- *
- * <b>Mapping the serialized \p coord buffer to a 2-dimensional
- * point selection array:</b>
- * To illustrate the construction of the contents of the \p coord
- * buffer, consider two simple examples: a selection of 5 points in
- * a 1-dimensional array and a selection of 3 points in a
- * 4-dimensional array.
- *
- * In the 1D case, we will be selecting five points and a 1D
- * dataspace has rank 1, so the selection will be described in a
- * 5-by-1 array. To select the 1st, 14th, 17th, 23rd, 8th elements
- * of the dataset, the selection array would be as follows
- * (remembering that point coordinates are zero-based):
- * \n 0
- * \n 13
- * \n 16
- * \n 22
- * \n 7
- *
- * This point selection array will be serialized in the \p coord
- * buffer as:
- * \n 0 13 16 22 7
- *
- * In the 4D case, we will be selecting three points and a 4D
- * dataspace has rank 4, so the selection will be described in a
- * 3-by-4 array. To select the points (1,1,1,1), (14,6,12,18), and
- * (8,22,30,22), the point selection array would be as follows:
- * \n 0 0 0 0
- * \n 13 5 11 17
- * \n 7 21 29 21
- *
- * This point selection array will be serialized in the \p coord
- * buffer as:
- * \n 0 0 0 0 13 5 11 17 7 21 29 21
- *
- * \version 1.6.4 C coord parameter type changed to \p const hsize_t.
- * \version 1.6.4 Fortran \p coord parameter type changed to \p INTEGER(HSIZE_T).
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sselect_elements(hid_t space_id, H5S_seloper_t op, size_t num_elem, const hsize_t *coord);
- /**
- * \ingroup H5S
- *
- * \brief Selects a hyperslab region to add to the current selected region
- *
- * \space_id
- * \param[in] op Operation to perform on current selection
- * \param[in] start Offset of start of hyperslab
- * \param[in] stride Hyperslab stride
- * \param[in] count Number of blocks included in hyperslab
- * \param[in] block Size of block in hyperslab
- *
- * \return \herr_t
- *
- * \details H5Sselect_hyperslab() selects a hyperslab region to add to the
- * current selected region for the dataspace specified by
- * \p space_id.
- *
- * The \p start, \p stride, \p count, and \p block arrays must be the
- * same size as the rank of the dataspace. For example, if the
- * dataspace is 4-dimensional, each of these parameters must be a
- * 1-dimensional array of size 4.
- *
- * The selection operator \p op determines how the new selection
- * is to be combined with the already existing selection for the
- * dataspace. The following operators are supported:
- *
- * <table>
- * <tr>
- * <td>#H5S_SELECT_SET</td>
- * <td>Replaces the existing selection with the
- * parameters from this call. Overlapping blocks
- * are not supported with this operator.</td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_OR</td>
- * <td>Adds the new selection to the existing selection.
- * (Binary OR)</td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_AND</td>
- * <td>Retains only the overlapping portions of the
- * new selection and the existing selection.
- * (Binary AND)</td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_XOR</td>
- * <td>Retains only the elements that are members of
- * the new selection or the existing selection,
- * excluding elements that are members of both
- * selections. (Binary exclusive-OR, XOR)
- * </td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_NOTB</td>
- * <td>Retains only elements of the existing selection
- * that are not in the new selection.</td>
- * </tr>
- * <tr>
- * <td>#H5S_SELECT_NOTA</td>
- * <td>Retains only elements of the new selection that
- * are not in the existing selection.</td>
- * </tr>
- * </table>
- *
- * The \p start array specifies the offset of the starting element
- * of the specified hyperslab.
- *
- * The \p stride array chooses array locations from the dataspace with
- * each value in the \p stride array determining how many elements to
- * move in each dimension. Setting a value in the \p stride array to
- * \p 1 moves to each element in that dimension of the dataspace;
- * setting a value of \p 2 in allocation in the \p stride array moves
- * to every other element in that dimension of the dataspace. In
- * other words, the \p stride determines the number of elements to
- * move from the \p start location in each dimension. Stride values
- * of \p 0 are not allowed. If the \p stride parameter is NULL, a
- * contiguous hyperslab is selected (as if each value in the \p stride
- * array were set to \p 1).
- *
- * The \p count array determines how many blocks to select from the
- * dataspace, in each dimension.
- *
- * The \p block array determines the size of the element block
- * selected from the dataspace. If the \p block parameter is set to
- * NULL, the block size defaults to a single element in each dimension
- * (as if each value in the \p block array were set to \p 1).
- *
- * For example, consider a 2-dimensional dataspace with hyperslab
- * selection settings as follows: the \p start offset is specified as
- * [1,1], \p stride is [4,4], \p count is [3,7], and \p block is [2,2].
- * In C, these settings will specify a hyperslab consisting of 21
- * 2x2 blocks of array elements starting with location (1,1) with the
- * selected blocks at locations (1,1), (5,1), (9,1), (1,5), (5,5), etc.;
- * in Fortran, they will specify a hyperslab consisting of 21 2x2
- * blocks of array elements starting with location (2,2) with the
- * selected blocks at locations (2,2), (6,2), (10,2), (2,6), (6,6), etc.
- *
- * Regions selected with this function call default to C order
- * iteration when I/O is performed.
- *
- * \version 1.4.0 Fortran subroutine introduced in this release.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sselect_hyperslab(hid_t space_id, H5S_seloper_t op, const hsize_t start[],
- const hsize_t stride[], const hsize_t count[], const hsize_t block[]);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Checks if current selection intersects with a block
- *
- * \space_id
- * \param[in] start Starting coordinate of block
- * \param[in] end Opposite ("ending") coordinate of block
- *
- * \return \htri_t
- *
- * \details H5Sselect_intersect_block() checks to see if the current
- * selection \p space_id in the dataspace intersects with the block
- * specified by \p start and \p end.
- *
- * \note Assumes that \p start & \p end block bounds are inclusive, so
- * \p start == \p end value is OK.
- *
- * \since 1.12.0
- *
- */
- H5_DLL htri_t H5Sselect_intersect_block(hid_t space_id, const hsize_t *start, const hsize_t *end);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Resets the selection region to include no elements
- *
- * \space_id{spaceid}
- *
- * \return \herr_t
- *
- * \details H5Sselect_none() resets the selection region for the dataspace
- * \p space_id to include no elements.
- *
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sselect_none(hid_t spaceid);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Projects the intersection of two source selections to a
- * destination selection
- *
- * \space_id{src_space_id}
- * \space_id{dst_space_id}
- * \space_id{src_intersect_space_id}
- *
- * \return Returns a dataspace with a selection equal to the intersection of
- * \p src_intersect_space_id and \p src_space_id projected from
- * \p src_space to \p dst_space on success, negative on failure.
- *
- * \details H5Sselect_project_intersection() computes the intersection
- * between two dataspace selections and projects that intersection
- * into a third selection.This can be useful for VOL developers to
- * implement chunked or virtual datasets.
- *
- * \since 1.12.0
- *
- */
- H5_DLL hid_t H5Sselect_project_intersection(hid_t src_space_id, hid_t dst_space_id,
- hid_t src_intersect_space_id);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Checks if two selections are the same shape
- *
- * \space_id{space1_id}
- * \space_id{space2_id}
- *
- * \return \htri_t
- *
- * \details H5Sselect_shape_same() checks to see if the current selection
- * in the dataspaces are the same dimensionality and shape.
- *
- * This is primarily used for reading the entire selection in
- * one swoop.
- *
- * \since 1.12.0
- *
- */
- H5_DLL htri_t H5Sselect_shape_same(hid_t space1_id, hid_t space2_id);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Verifies that the selection is within the extent of the dataspace
- *
- * \space_id{spaceid}
- *
- * \return \htri_t
- *
- * \details H5Sselect_valid() verifies that the selection for the dataspace
- * \p space_id is within the extent of the dataspace if the current
- * offset for the dataspace is used.
- *
- * \version 1.4.0 Fortran subroutine introduced in this release.
- * \since 1.0.0
- *
- */
- H5_DLL htri_t H5Sselect_valid(hid_t spaceid);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Resets the extent of a dataspace back to "none"
- *
- * \space_id
- *
- * \return \herr_t
- *
- * \details H5Sset_extent_none() resets the type of a dataspace to
- * #H5S_NULL with no extent information stored for the dataspace.
- *
- * \version 1.10.7, 1.12.1 The function behavior changed. The previous
- * behavior was to set the class to #H5S_NO_CLASS.
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sset_extent_none(hid_t space_id);
- /*--------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Sets or resets the size of an existing dataspace
- *
- * \space_id
- * \param[in] rank Rank, or dimensionality, of the dataspace
- * \param[in] dims Array containing current size of dataspace
- * \param[in] max Array containing maximum size of dataspace
- *
- * \return \herr_t
- *
- * \details H5Sset_extent_simple() sets or resets the size of an existing
- * dataspace.
- *
- * \p dims is an array of size \p rank which contains the new size
- * of each dimension in the dataspace. \p max is an array of size
- * \p rank which contains the maximum size of each dimension in
- * the dataspace.
- *
- * Any previous extent is removed from the dataspace, the dataspace
- * type is set to #H5S_SIMPLE, and the extent is set as specified.
- *
- * \version 1.4.0 Fortran subroutine was introduced.
- * \since 1.0.0
- *
- */
- H5_DLL herr_t H5Sset_extent_simple(hid_t space_id, int rank, const hsize_t dims[], const hsize_t max[]);
- /* Symbols defined for compatibility with previous versions of the HDF5 API.
- *
- * Use of these symbols is deprecated.
- */
- #ifndef H5_NO_DEPRECATED_SYMBOLS
- /* Function prototypes */
- /* --------------------------------------------------------------------------*/
- /**\ingroup H5S
- *
- * \brief Encodes a data space object description into a binary buffer
- *
- * \space_id{obj_id}
- * \param[in,out] buf Buffer for the object to be encoded into;
- * If the provided buffer is NULL, only the size of
- * buffer needed is returned through \p nalloc.
- * \param[in,out] nalloc The size of the allocated buffer
- *
- * \return \herr_t
- *
- * \deprecated Deprecated in favor of H5Sencode2()
- *
- * \details Given the data space identifier \p obj_id, H5Sencode1() converts
- * a data space description into binary form in a buffer. Using
- * this binary form in the buffer, a data space object can be
- * reconstructed using H5Sdecode() to return a new object handle
- * (\p hid_t) for this data space.
- *
- * A preliminary H5Sencode1() call can be made to find out the size
- * of the buffer needed. This value is returned as \p nalloc. That
- * value can then be assigned to \p nalloc for a second H5Sencode1()
- * call, which will retrieve the actual encoded object.
- *
- * If the library finds out \p nalloc is not big enough for the
- * object, it simply returns the size of the buffer needed through
- * \p nalloc without encoding the provided buffer.
- *
- * The types of data space addressed in this function are null,
- * scalar, and simple space. For a simple data space, the information
- * on the selection, for example, hyperslab selection, is also
- * encoded and decoded. A complex data space has not been
- * implemented in the library.
- *
- * \version 1.12.0 The function H5Sencode() was renamed H5Sencode1() and
- * deprecated.
- * \since 1.8.0
- *
- */
- H5_DLL herr_t H5Sencode1(hid_t obj_id, void *buf, size_t *nalloc);
- #endif /* H5_NO_DEPRECATED_SYMBOLS */
- #ifdef __cplusplus
- }
- #endif
- #endif /* H5Spublic_H */
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